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Metaproteomic assessment of gut microbial and host functional perturbations in Helicobacter pylori-infected patients subjected to an antimicrobial protocol 1-gen-2023 Abbondio, M.; Tanca, A.; De Diego, L.; Sau, R.; Bibbo, S.; Pes, G. M.; Dore, M. P.; Uzzau, S.
Meta4P: A User-Friendly Tool to Parse Label-Free Quantitative Metaproteomic Data and Taxonomic/Functional Annotations 1-gen-2023 Porcheddu, Massimo; Abbondio, Marcello; De Diego, Laura; Uzzau, Sergio; Tanca, Alessandro
Unipept Desktop 2.0: Construction of Targeted Reference Protein Databases for Metaproteogenomics Analyses 1-gen-2023 Verschaffelt, Pieter; Tanca, Alessandro; Abbondio, Marcello; Van Den Bossche, Tim; Moortele, Tibo Vande; Dawyndt, Peter; Martens, Lennart; Mesuere, Bart
Metagenomic Changes of Gut Microbiota following Treatment of Helicobacter pylori Infection with a Simplified Low-Dose Quadruple Therapy with Bismuth or Lactobacillus reuteri 1-gen-2022 Dore, M. P.; Sau, R.; Niolu, C.; Abbondio, M.; Tanca, A.; Bibbo, S.; Loria, M.; Pes, G. M.; Uzzau, S.
Metaproteomic profile of the colonic luminal microbiota from patients with colon cancer 1-gen-2022 Tanca, Alessandro; Abbondio, Marcello; Fiorito, Giovanni; Pira, Giovanna; Sau, Rosangela; Manca, Alessandra; Muroni, Maria Rosaria; Porcu, Alberto; Scanu, Antonio Mario; Paolo, Cossu-Rocca; DE MIGLIO, Maria Rosaria; Uzzau, Sergio
Comparative Evaluation of MaxQuant and Proteome Discoverer MS1-Based Protein Quantification Tools 1-gen-2021 Palomba, A.; Abbondio, M.; Fiorito, G.; Uzzau, S.; Pagnozzi, D.; Tanca, A.
Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows 1-gen-2021 Van Den Bossche, T.; Kunath, B. J.; Schallert, K.; Schape, S. S.; Abraham, P. E.; Armengaud, J.; Arntzen, M. O.; Bassignani, A.; Benndorf, D.; Fuchs, S.; Giannone, R. J.; Griffin, T. J.; Hagen, L. H.; Halder, R.; Henry, C.; Hettich, R. L.; Heyer, R.; Jagtap, P.; Jehmlich, N.; Jensen, M.; Juste, C.; Kleiner, M.; Langella, O.; Lehmann, T.; Leith, E.; May, P.; Mesuere, B.; Miotello, G.; Peters, S. L.; Pible, O.; Queiros, P. T.; Reichl, U.; Renard, B. Y.; Schiebenhoefer, H.; Sczyrba, A.; Tanca, A.; Trappe, K.; Trezzi, J. -P.; Uzzau, S.; Verschaffelt, P.; von Bergen, M.; Wilmes, P.; Wolf, M.; Martens, L.; Muth, T.
Time-restricted feeding induces Lactobacillus- and Akkermansia-specific functional changes in the rat fecal microbiota 1-gen-2021 Palomba, A.; Tanca, A.; Abbondio, M.; Sau, R.; Serra, M.; Marongiu, F.; Fraumene, C.; Pagnozzi, D.; Laconi, E.; Uzzau, S.
The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes 1-gen-2021 Van Den Bossche, T.; Arntzen, M. O.; Becher, D.; Benndorf, D.; Eijsink, V. G. H.; Henry, C.; Jagtap, P. D.; Jehmlich, N.; Juste, C.; Kunath, B. J.; Mesuere, B.; Muth, T.; Pope, P. B.; Seifert, J.; Tanca, A.; Uzzau, S.; Wilmes, P.; Hettich, R. L.; Armengaud, J.
Fecal Microbiota Signatures in Celiac Disease Patients With Poly-Autoimmunity 1-gen-2020 Bibbo, S.; Abbondio, M.; Sau, R.; Tanca, A.; Pira, G.; Errigo, A.; Manetti, R.; Pes, G. M.; Dore, M. P.; Uzzau, S.
Fecal metaproteomic analysis reveals unique changes of the gut microbiome functions after consumption of sourdough Carasau bread 1-gen-2019 Abbondio, M.; Palomba, A.; Tanca, A.; Fraumene, C.; Pagnozzi, D.; Serra, M.; Marongiu, Francesco; Laconi, Ezio; Uzzau, S.
Unipept 4.0: functional analysis of metaproteome data 1-gen-2019 Gurdeep Singh, Robbert; Tanca, Alessandro; Palomba, Antonio; Van der Jeugt, Felix; Verschaffelt, Pieter; Uzzau, Sergio; Martens, Lennart; Dawyndt, Peter; Mesuere, Bart
Clostridial butyrate biosynthesis enzymes are significantly depleted in the gut microbiota of nonobese diabetic mice 1-gen-2018 Tanca, Alessandro; Palomba, Antonio; Fraumene, Cristina; Manghina, Valeria; Silverman, Michael; Uzzau, Sergio
Disseminating metaproteomic informatics capabilities and knowledge using the Galaxy-P framework 1-gen-2018 Blank, Clemens; Easterly, Caleb; Gruening, Bjoern; Johnson, James; Kolmeder, Carolin A.; Kumar, Praveen; May, Damon; Mehta, Subina; Mesuere, Bart; Brown, Zachary; Elias, Joshua E.; Hervey, W. Judson; Mcgowan, Thomas; Muth, Thilo; Nunn, Brook L.; Rudney, Joel; Tanca, Alessandro; Griffin, Timothy J.; Jagtap, Pratik D.
Caloric restriction promotes rapid expansion and long-lasting increase of Lactobacillus in the rat fecal microbiota 1-gen-2018 Fraumene, Cristina; Manghina, Valeria; Cadoni, Erika; Marongiu, Fabio; Abbondio, Marcello; Serra, Monica; Palomba, Antonio; Tanca, Alessandro; Laconi, Ezio; Uzzau, Sergio
Metagenomic taxonomy-guided database-searching strategy for improving metaproteomic analysis 1-gen-2018 Xiao, Jinqiu; Tanca, Alessandro; Jia, Ben; Yang, Runqing; Wang, Bo; Zhang, Yu; Li, Jing
The Sarda Sheep Host Fecal Proteome 1-gen-2018 Palomba, Antonio; Tanca, Alessandro; Addis, Maria Filippa; Pagnozzi, Daniela; Uzzau, Sergio
Caloric restriction promotes functional changes involving short-chain fatty acid biosynthesis in the rat gut microbiota 1-gen-2018 Tanca, Alessandro; Abbondio, Marcello; Palomba, Antonio; Fraumene, Cristina; Marongiu, Fabio; Serra, Monica; Pagnozzi, Daniela; Laconi, Ezio; Uzzau, Sergio
Potential and active functions in the gut microbiota of a healthy human cohort 1-gen-2017 Tanca, Alessandro; Abbondio, Marcello; Palomba, Antonio; Fraumene, Cristina; Manghina, Valeria; Cucca, Francesco; Fiorillo, Edoardo; Uzzau, Sergio
Metaproteogenomics reveals taxonomic and functional changes between cecal and fecal microbiota in mouse 1-gen-2017 Tanca, Alessandro; Manghina, Valeria; Fraumene, Cristina; Palomba, Antonio; Abbondio, Marcello; Deligios, Massimo; Silverman, Michael; Uzzau, Sergio
Mostrati risultati da 1 a 20 di 63
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